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Smart Reasoning:

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Qaagi - Book of Why

Causes

Effects

the primary mutation(passive) was created bya nonsense codon

The mutation found in MH5887createda nonsense codon

depletion of eRF1 [ 14(passive) caused bynonsense codon readthrough

a base substitutionresultinga nonsense codon

and EcoRI , Klenow filling in the resulting 5′ overhangs , and circularizationto createa nonsense codon

transcriptional errorscreatingnonsense codons

mutations and ... as a result(passive) are ... caused byNonsense codons

multicopy ITT1(passive) caused bynonsense codons

these omnipotent suppressors(passive) caused bynonsense codon readthrough

a primary unusual change in a gene occurring spontaneously or by induction(passive) created bya nonsense codon

to be the substitution of T for C at position 3185creatinga nonsense codon

about one third of all known disease - causing mutationsoriginatea nonsense codon

point mutationscreatinga nonsense codon

either from a point mutation or a frameshiftresultingeither from a point mutation or a frameshift

to a truncation at residue 437 andledto a truncation at residue 437 and

to the production of truncated N - terminal APC fragmentsleadingto the production of truncated N - terminal APC fragments

in the expression of a truncated polypeptide [ 3resultsin the expression of a truncated polypeptide [ 3

the variant is reportable , STOP Step 4cresultsthe variant is reportable , STOP Step 4c

NMD and the 3′-most exoncausingNMD and the 3′-most exon

termination of a polypeptide chain E. Genetic codecausetermination of a polypeptide chain E. Genetic code

translation to stop prematurelycausestranslation to stop prematurely

an RNA partitioning shifttriggeran RNA partitioning shift

in a stop codon that would not make sense in the reading of the sequencewould resultin a stop codon that would not make sense in the reading of the sequence

termination of a polypeptide chain UAA ( ocher ) , UAG ( amber ) , and UGA ( opalcausetermination of a polypeptide chain UAA ( ocher ) , UAG ( amber ) , and UGA ( opal

normal translationpreventnormal translation

a decay pathway distinct from that seen for Fed-1 mRNA in the darktriggera decay pathway distinct from that seen for Fed-1 mRNA in the dark

termination of a polypeptide chain – UAA ( ochre ) , UAG ( ambercausetermination of a polypeptide chain – UAA ( ochre ) , UAG ( amber

premature stop sitescreatepremature stop sites

from point mutations that result in stop codons , which prematurely terminate the translation processresultfrom point mutations that result in stop codons , which prematurely terminate the translation process

in the production of truncated proteins that have the potential to increase disease severitywould ... resultin the production of truncated proteins that have the potential to increase disease severity

in truncated proteins ( Figure 5Dwould resultin truncated proteins ( Figure 5D

genetic disorders(passive) caused bygenetic disorders

deadenylation - independent decapping in mammalian cellsmight triggerdeadenylation - independent decapping in mammalian cells

the protein from being synthesizedpreventsthe protein from being synthesized

nuclear eventscould influencenuclear events

from an introduced upstream reading frameresultingfrom an introduced upstream reading frame

in truncated inferred proteins ( Table 7 , which is published as supporting information on the PNAS web sitealso resultingin truncated inferred proteins ( Table 7 , which is published as supporting information on the PNAS web site

translational reinitiation events(passive) triggered bytranslational reinitiation events

the CYBB gene to be non - functional ( Figure 2causedthe CYBB gene to be non - functional ( Figure 2

in lack of detectable functional protein ( 53resultingin lack of detectable functional protein ( 53

in polarityresultin polarity

in a null phenotyperesultsin a null phenotype

in truncation of the protein , a splicing errorresultingin truncation of the protein , a splicing error

pre - mRNA splicing ( reviewed in references 32can influencepre - mRNA splicing ( reviewed in references 32

the termination of translation ( i.e. the end of the polypeptide chaincausesthe termination of translation ( i.e. the end of the polypeptide chain

at the filled EcoRI sitewas createdat the filled EcoRI site

premature termination of translaВ tioncausingpremature termination of translaВ tion

alt - mRNA up - regulationcausealt - mRNA up - regulation

at position 79 ( TGA ) by a frameshift and nonsense mutations at codons 209createdat position 79 ( TGA ) by a frameshift and nonsense mutations at codons 209

in a complete loss of enzyme activityresultsin a complete loss of enzyme activity

in termination of the protein sequence with amino acid 252resultingin termination of the protein sequence with amino acid 252

to a truncated proteinleadingto a truncated protein

the expression a Pretty element of contentresultsthe expression a Pretty element of content

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Smart Reasoning:

C&E

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